Advances in Bioinformatics

Microarrays.- Highlighting Differential Gene Expression between Two Condition Microarrays through Heterogeneous Genomic Data: Application to Lesihmania infantum Stages Comparison.- An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets.- Automatic Workflow during the Reuse Phase of a CBP System Applied to Microarray Analysis.- A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets.- Data Mining and Data Integration.- Predicting the Start of Protein ?-Helices Using Machine Learning Algorithms.- A Data Mining Approach for the Detection of High-Risk Breast Cancer Groups.- GRASP for Instance Selection in Medical Data Sets.- Expanding Gene-Based PubMed Queries.- Improving Cross Mapping in Biomedical Databases.- An Efficient Multi-class Support Vector Machine Classifier for Protein Fold Recognition.- Feature Selection Using Multi-Objective Evolutionary Algorithms: Application to Cardiac SPECT Diagnosis.- Phylogenetics and Sequence Analysis.- Two Results on Distances for Phylogenetic Networks.- Cramér Coefficient in Genome Evolution.- An Application for Studying Tandem Repeats in Orthologous Genes.- Accurate Selection of Models of Protein Evolution.- Scalable Phylogenetics through Input Preprocessing.- The Median of the Distance between Two Leaves in a Phylogenetic Tree.- In Silico AFLP: An Application to Assess What Is Needed to Resolve a Phylogeny.- Employing Compact Intra-genomic Language Models to Predict Genomic Sequences and Characterize Their Entropy.- Biomedical Applications.- Structure Based Design of Potential Inhibitors of Steroid Sulfatase.- Agent-Based Model of the Endocrine Pancreas and Interaction with Innate Immune System.- State-of-the-ArtGenetic Programming for Predicting Human Oral Bioavailability of Drugs.- Pharmacophore-Based Screening as a Clue for the Discovery of New P-Glycoprotein Inhibitors.- Bioinformatics Applications.- e-BiMotif: Combining Sequence Alignment and Biclustering to Unravel Structured Motifs.- Applying a Metabolic Footprinting Approach to Characterize the Impact of the Recombinant Protein Production in Escherichia coli.- Rbbt: A Framework for Fast Bioinformatics Development with Ruby.- Analysis of the Effect of Reversibility Constraints on the Predictions of Genome-Scale Metabolic Models.- Enhancing Elementary Flux Modes Analysis Using Filtering Techniques in an Integrated Environment.- Genome Visualization in Space.- A Hybrid Scheme to Solve the Protein Structure Prediction Problem.