Applied Parallel Computing

Invited Talks.- Fast and Reliable Random Number Generators for Scientific Computing.- New Generalized Data Structures for Matrices Lead to a Variety of High Performance Dense Linear Algebra Algorithms.- Management of Deep Memory Hierarchies – Recursive Blocked Algorithms and Hybrid Data Structures for Dense Matrix Computations.- Fortran Is Getting More and More Powerful.- Large-Scale Computations with the Unified Danish Eulerian Model.- Minisymposia.- Interval Methods: An Introduction.- A Chemical Engineering Challenge Problem That Can Benefit from Interval Methods.- Performance of Taylor Model Methods for Validated Integration of ODEs.- On the Use of Intervals in Scientific Computing: What Is the Best Transition from Linear to Quadratic Approximation?.- HPC-ICTM: The Interval Categorizer Tessellation-Based Model for High Performance Computing.- Counting the Number of Connected Components of a Set and Its Application to Robotics.- Interval-Based Markov Decision Processes for Regulating Interactions Between Two Agents in Multi-agent Systems.- A Domain Theoretic Account of Euler’s Method for Solving Initial Value Problems.- Reliable Computation of Equilibrium States and Bifurcations in Nonlinear Dynamics.- A Verification Method for Solutions of Linear Programming Problems.- Compressing 3D Measurement Data Under Interval Uncertainty.- Computing Interval Bounds for Statistical Characteristics Under Expert-Provided Bounds on Probability Density Functions.- Interval Parallel Global Optimization with Charm++.- On the Approximation of Interval Functions.- The Distributed Interval Geometric Machine Model.- New Algorithms for Statistical Analysis of Interval Data.- On Efficiency of Tightening Bounds in Interval Global Optimization.- Trends in Large Scale Computing: An Introduction.- Ygdrasil: Aggregator Network Toolkit for Large Scale Systems and the Grid.- Enabling Coupled Scientific Simulations on the Grid.- High Performance Linear Algebra Algorithms: An Introduction.- Applying Software Testing Metrics to Lapack.- A Matrix-Type for Performance–Portability.- A New Array Format for Symmetric and Triangular Matrices.- A Family of High-Performance Matrix Multiplication Algorithms.- Substructuring, Dimension Reduction and Applications: An Introduction.- Parallel Algorithms for Balanced Truncation Model Reduction of Sparse Systems.- Towards an Optimal Substructuring Method for Model Reduction.- Model Reduction for RF MEMS Simulation.- A Model-Order Reduction Technique for Low Rank Rational Perturbations of Linear Eigenproblems.- Parallel Global Optimization of Foundation Schemes in Civil Engineering.- A Combined Linear and Nonlinear Preconditioning Technique for Incompressible Navier-Stokes Equations.- Structure-Preserving Model Reduction.- A Comparison of Parallel Preconditioners for the Sparse Generalized Eigenvalue Problems by Rayleigh-Quotient Minimization.- Theoretical Relations Between Domain Decomposition and Dynamic Substructuring.- Model Order Reduction for Large Scale Engineering Models Developed in ANSYS.- Rational Krylov for Large Nonlinear Eigenproblems.- Algebraic Sub-structuring for Electromagnetic Applications.- Parallel Processing in Science and Engineering: An Introduction.- Rapid Development of High-Performance Linear Algebra Libraries.- Automatic Derivation of Linear Algebra Algorithms with Application to Control Theory.- Cluster Computing for Financial Engineering.- Semi-automatic Generation of Grid Computing Interfaces for Numerical Software Libraries.- Rapid Development of High-Performance Out-of-Core Solvers.- ALPS: A Software Framework for Parallel Space-Time Adaptive Processing.- Hybrid Parallelization of CFD Applications with Dynamic Thread Balancing.- Distributed Computing: Tools, Paradigms and Infrastructures. An Introduction.- Parallelization of GSL: Performance of Case Studies.- Design of Policy-Based Security Mechanisms in a Distributed Web Services Architecture.- Supporting Location-Aware Distributed Applications on Mobile Devices.- Grid Application Development on the Basis of Web Portal Technology.- A Distributed Divide and Conquer Skeleton.- A Tool to Display Array Access Patterns in OpenMP Programs.- A Model Analysis of a Distributed Monitoring System Using a Multi-formalism Approach.- Performance Oriented Development and Tuning of GRID Applications.- Towards a Bulk-Synchronous Distributed Shared Memory Programming Environment for Grids.- High-Performance Computing in Earth- and Space-Science: An Introduction.- Applying High Performance Computing Techniques in Astrophysics.- Statistical Properties of Dissipative MHD Accelerators.- A Simulation Model for Forest Fires.- MHD Modeling of the Interaction Between the Solar Wind and Solar System Objects.- Implementing Applications with the Earth System Modeling Framework.- Parallel Discrete Event Simulations of Grid-Based Models: Asynchronous Electromagnetic Hybrid Code.- Electromagnetic Simulations of Dusty Plasmas.- Advanced Algorithms and Software Components for Scientific Computing: An Introduction.- Extending PSBLAS to Build Parallel Schwarz Preconditioners.- A Direct Orthogonal Sparse Static Methodology for a Finite Continuation Hybrid LP Solver.- Applying Parallel Direct Solver Techniques to Build Robust High Performance Preconditioners.- The Design of Trilinos.- Software Architecture Issues in Scientific Component Development.- Parallel Hybrid Sparse Solvers Through Flexible Incomplete Cholesky Preconditioning.- Parallel Heuristics for an On-Line Scientific Database for Efficient Function Approximation.- Software Engineering and Problem Solving Environments for Scientific Computing: An Introduction.- A General Architecture for Grid-Based PSE Toolkits.- An Expert Assistant for Computer Aided Parallelization.- Scalable Middleware Environment for Agent-Based Internet Applications.- Automatic Generation of Wrapper Code and Test Scripts for Problem Solving Environments.- Runtime Software Techniques for Enhancing High-Performance Applications: An introduction.- Efficient Execution of Scientific Computation on Geographically Distributed Clusters.- Improving the Performance of Large-Scale Unstructured PDE Applications.- A Runtime Adaptive Load Balancing Algorithm for Particle Simulations.- Evaluating Parallel Algorithms for Solving Sylvester-Type Matrix Equations: Direct Transformation-Based Versus Iterative Matrix-Sign-Function-Based Methods.- Performance Analysis for Parallel Adaptive FEM on SMP Clusters.- Performance Tuning of Matrix Triple Products Based on Matrix Structure.- Adapting Distributed Scientific Applications to Run-Time Network Conditions.- Sparse Direct Linear Solvers: An Introduction.- Oblio: Design and Performance.- Performance Analysis of Parallel Right-Looking Sparse LU Factorization on Two Dimensional Grids of Processors.- A Shared- and Distributed-Memory Parallel Sparse Direct Solver.- Simple and Efficient Modifications of Elimination Orderings.- Optimization of a Statically Partitioned Hypermatrix Sparse Cholesky Factorization.- Maximum-Weighted Matching Strategies and the Application to Symmetric Indefinite Systems.- An Evaluation of Sparse Direct Symmetric Solvers: An Introduction and Preliminary Findings.- Treatment of Large Scientific Problems: An Introduction.- Towards a Parallel Multilevel Preconditioned Maxwell Eigensolver.- On Improvement of the Volcano Search and Optimization Strategy.- Aggregation-Based Multilevel Preconditioning of Non-conforming FEM Elasticity Problems.- Efficient Solvers for 3-D Homogenized Elasticity Model.- Performance Evaluation of a Parallel Algorithm for a Radiative Transfer Problem.- Performance Evaluation and Design of Hardware-Aware PDE Solvers: An Introduction.- A Cache-Aware Algorithm for PDEs on Hierarchical Data Structures.- Constructing Flexible, Yet Run Time Efficient PDE Solvers.- Analyzing Advanced PDE Solvers Through Simulation.- Towards Cache-Optimized Multigrid Using Patch-Adaptive Relaxation.- Hierarchical Partitioning and Dynamic Load Balancing for Scientific Computation.- Cache Optimizations for Iterative Numerical Codes Aware of Hardware Prefetching.- Computationally Expensive Methods in Statistics: An Introduction.- Dimension Reduction vs. Variable Selection.- Reproducible Statistical Analysis in Microarray Profiling Studies.- Step-Down FDR Procedures for Large Numbers of Hypotheses.- Applying Security Engineering to Build Security Countermeasures: An Introduction.- CC-SEMS: A CC Based Information System Security Evaluation Management System.- A Secure Migration Mechanism of Mobile Agents Under Mobile Agent Environments.- A Flexible Privilege Management Scheme for Role Graph Model.- The System Modeling for Detections of New Malicious Codes.- Information Hiding Method Using CDMA on Wave Files.- Efficient Key Distribution Protocol for Electronic Commerce in Mobile Communications.- A Framework for Modeling Organization Structure in Role Engineering.- An Efficient Pointer Protection Scheme to Defend Buffer Overflow Attacks.- Contributed Talks.- Parallel Hierarchical Radiosity: The PIT Approach.- Optimizing Locationing of Multiple Masters for Master-Worker Grid Applications.- An OGSA-Based Bank Service for Grid Accounting Systems.- A Grid Resource Broker Supporting Advance Reservations and Benchmark-Based Resource Selection.- The Dragon Graph: A New Interconnection Network for High Speed Computing.- Speeding up Parallel Graph Coloring.- On the Efficient Generation of Taylor Expansions for DAE Solutions by Automatic Differentiation.- Edge-Disjoint Hamiltonian Cycles of WK-Recursive Networks.- Simulation-Based Analysis of Parallel Runge-Kutta Solvers.- A Novel Task Scheduling Algorithm for Distributed Heterogeneous Computing Systems.- Study of Load Balancing Strategies for Finite Element Computations on Heterogeneous Clusters.- Parallel Algorithms for the Determination of Lyapunov Characteristics of Large Nonlinear Dynamical Systems.- Online Task Scheduling on Heterogeneous Clusters: An Experimental Study.- A Parallel Method for Large Sparse Generalized Eigenvalue Problems by OmniRPC in a Grid Environment.- An Implementation of Parallel 3-D FFT Using Short Vector SIMD Instructions on Clusters of PCs.